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BIOSCAN INC image reconstruction and analysis software
Image Reconstruction And Analysis Software, supplied by BIOSCAN INC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/image+reconstruction+and+analysis+software/pm24343796-59-8-14?v=BIOSCAN+INC
Average 90 stars, based on 1 article reviews
image reconstruction and analysis software - by Bioz Stars, 2026-07
90/100 stars

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(a) Top panel. MicroCT views using <t>Fiji</t> <t>software</t> show tooth family unit development at resting (tooth family unit 7), initiation (tooth family unit 9), and growth (tooth family unit 8) phases by viewing a single plane of the <t>3D</t> dataset. Bottom panel. These same stages are shown from H&E staining of sectioned materials. Higher magnification views of the indicated areas are shown. (b) 3D visualization of teeth 7–12. (c) Tracing of tooth development at different hatching, 4 months and 1 year. f functional tooth, r replacement tooth, r1 replacement tooth 1, r2 replacement tooth 2, dl dental lamina. Panels A and C are from [11]
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(a) Top panel. MicroCT views using <t>Fiji</t> <t>software</t> show tooth family unit development at resting (tooth family unit 7), initiation (tooth family unit 9), and growth (tooth family unit 8) phases by viewing a single plane of the <t>3D</t> dataset. Bottom panel. These same stages are shown from H&E staining of sectioned materials. Higher magnification views of the indicated areas are shown. (b) 3D visualization of teeth 7–12. (c) Tracing of tooth development at different hatching, 4 months and 1 year. f functional tooth, r replacement tooth, r1 replacement tooth 1, r2 replacement tooth 2, dl dental lamina. Panels A and C are from [11]
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BIOSCAN INC image reconstruction and analysis software
<t>Imaris</t> snapshot images of confocal z-stack projections that visualise the entire depth of the retinal fibre layer where both astrocytes and blood vessels are situated. The overlapping immunohistochemistry represents connexin heterogeneity in gap junction plaques expressed by astrocytes and captured using high resolution three-dimensional projection, simulated fluorescence processing and orthogonal mode camera dialogue. The GFAP and GS isolectin B4 stain were omitted from these images to better illustrate the fluorescence of the connexins. A&C were taken in the central retinal region and B&D from a peripheral retinal region. A&C and B&D are a different angle of the same <t>3D</t> analysis to show different connexin combinations as indicated by the arrows. Immunostaining of astrocyte connexins represents Cx26 (blue), Cx30 (red), Cx43 (green) and Cx45 (brown). Different colocalisation patterns of connexin proteins in diverse astrocyte connexin hemichannels were qualitatively analysed (1Cx protein, small arrows, 2Cx and 3Cx proteins, curved arrows, and 4Cx proteins, large arrowheads). All images are highly zoomed and rendered confocal z-slice projections. For qualitative purposes, displayed images were also constructed using automated scale bar, object frame (grid, tickmarks and box) and XYZ clipping plane (i.e. crops object below the plane). The set camera angle logarithmic functions were also applied to measure angle, elevation and azimuth parameters for each of the images represented. This was as follows: angle = −5.6521 (A), 4.4572 (B), −6.3247 (C), −0.0729 (D), elevation = 91.8453 (A), 88.6771 (B), 93.7761 (C), 90.0196 (D), azimuth = 119.9393 (A), −65.222 (B), 127.6513 (C), 93.3840 (D).
Image Reconstruction And Analysis Software, supplied by BIOSCAN INC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/image+reconstruction+and+analysis+software/pm24343796-59-8-14?v=BIOSCAN+INC
Average 90 stars, based on 1 article reviews
image reconstruction and analysis software - by Bioz Stars, 2026-07
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ScImage Inc software for longitudinal reconstructive ivus image analysis netra ivus
<t>Imaris</t> snapshot images of confocal z-stack projections that visualise the entire depth of the retinal fibre layer where both astrocytes and blood vessels are situated. The overlapping immunohistochemistry represents connexin heterogeneity in gap junction plaques expressed by astrocytes and captured using high resolution three-dimensional projection, simulated fluorescence processing and orthogonal mode camera dialogue. The GFAP and GS isolectin B4 stain were omitted from these images to better illustrate the fluorescence of the connexins. A&C were taken in the central retinal region and B&D from a peripheral retinal region. A&C and B&D are a different angle of the same <t>3D</t> analysis to show different connexin combinations as indicated by the arrows. Immunostaining of astrocyte connexins represents Cx26 (blue), Cx30 (red), Cx43 (green) and Cx45 (brown). Different colocalisation patterns of connexin proteins in diverse astrocyte connexin hemichannels were qualitatively analysed (1Cx protein, small arrows, 2Cx and 3Cx proteins, curved arrows, and 4Cx proteins, large arrowheads). All images are highly zoomed and rendered confocal z-slice projections. For qualitative purposes, displayed images were also constructed using automated scale bar, object frame (grid, tickmarks and box) and XYZ clipping plane (i.e. crops object below the plane). The set camera angle logarithmic functions were also applied to measure angle, elevation and azimuth parameters for each of the images represented. This was as follows: angle = −5.6521 (A), 4.4572 (B), −6.3247 (C), −0.0729 (D), elevation = 91.8453 (A), 88.6771 (B), 93.7761 (C), 90.0196 (D), azimuth = 119.9393 (A), −65.222 (B), 127.6513 (C), 93.3840 (D).
Software For Longitudinal Reconstructive Ivus Image Analysis Netra Ivus, supplied by ScImage Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/image+reconstruction+and+analysis+software/pm18654013-58-12-18?v=ScImage+Inc
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Image Search Results


(a) Top panel. MicroCT views using Fiji software show tooth family unit development at resting (tooth family unit 7), initiation (tooth family unit 9), and growth (tooth family unit 8) phases by viewing a single plane of the 3D dataset. Bottom panel. These same stages are shown from H&E staining of sectioned materials. Higher magnification views of the indicated areas are shown. (b) 3D visualization of teeth 7–12. (c) Tracing of tooth development at different hatching, 4 months and 1 year. f functional tooth, r replacement tooth, r1 replacement tooth 1, r2 replacement tooth 2, dl dental lamina. Panels A and C are from [11]

Journal: Methods in molecular biology (Clifton, N.J.)

Article Title: MicroCT Imaging on Living Alligator Teeth Reveals Natural Tooth Cycling

doi: 10.1007/978-1-4939-7216-6_24

Figure Lengend Snippet: (a) Top panel. MicroCT views using Fiji software show tooth family unit development at resting (tooth family unit 7), initiation (tooth family unit 9), and growth (tooth family unit 8) phases by viewing a single plane of the 3D dataset. Bottom panel. These same stages are shown from H&E staining of sectioned materials. Higher magnification views of the indicated areas are shown. (b) 3D visualization of teeth 7–12. (c) Tracing of tooth development at different hatching, 4 months and 1 year. f functional tooth, r replacement tooth, r1 replacement tooth 1, r2 replacement tooth 2, dl dental lamina. Panels A and C are from [11]

Article Snippet: 3D Reconstruction and Image Analysis Amira software.

Techniques: Software, Staining, Functional Assay

Imaris snapshot images of confocal z-stack projections that visualise the entire depth of the retinal fibre layer where both astrocytes and blood vessels are situated. The overlapping immunohistochemistry represents connexin heterogeneity in gap junction plaques expressed by astrocytes and captured using high resolution three-dimensional projection, simulated fluorescence processing and orthogonal mode camera dialogue. The GFAP and GS isolectin B4 stain were omitted from these images to better illustrate the fluorescence of the connexins. A&C were taken in the central retinal region and B&D from a peripheral retinal region. A&C and B&D are a different angle of the same 3D analysis to show different connexin combinations as indicated by the arrows. Immunostaining of astrocyte connexins represents Cx26 (blue), Cx30 (red), Cx43 (green) and Cx45 (brown). Different colocalisation patterns of connexin proteins in diverse astrocyte connexin hemichannels were qualitatively analysed (1Cx protein, small arrows, 2Cx and 3Cx proteins, curved arrows, and 4Cx proteins, large arrowheads). All images are highly zoomed and rendered confocal z-slice projections. For qualitative purposes, displayed images were also constructed using automated scale bar, object frame (grid, tickmarks and box) and XYZ clipping plane (i.e. crops object below the plane). The set camera angle logarithmic functions were also applied to measure angle, elevation and azimuth parameters for each of the images represented. This was as follows: angle = −5.6521 (A), 4.4572 (B), −6.3247 (C), −0.0729 (D), elevation = 91.8453 (A), 88.6771 (B), 93.7761 (C), 90.0196 (D), azimuth = 119.9393 (A), −65.222 (B), 127.6513 (C), 93.3840 (D).

Journal: PLoS ONE

Article Title: Connexin 30 Expression and Frequency of Connexin Heterogeneity in Astrocyte Gap Junction Plaques Increase with Age in the Rat Retina

doi: 10.1371/journal.pone.0057038

Figure Lengend Snippet: Imaris snapshot images of confocal z-stack projections that visualise the entire depth of the retinal fibre layer where both astrocytes and blood vessels are situated. The overlapping immunohistochemistry represents connexin heterogeneity in gap junction plaques expressed by astrocytes and captured using high resolution three-dimensional projection, simulated fluorescence processing and orthogonal mode camera dialogue. The GFAP and GS isolectin B4 stain were omitted from these images to better illustrate the fluorescence of the connexins. A&C were taken in the central retinal region and B&D from a peripheral retinal region. A&C and B&D are a different angle of the same 3D analysis to show different connexin combinations as indicated by the arrows. Immunostaining of astrocyte connexins represents Cx26 (blue), Cx30 (red), Cx43 (green) and Cx45 (brown). Different colocalisation patterns of connexin proteins in diverse astrocyte connexin hemichannels were qualitatively analysed (1Cx protein, small arrows, 2Cx and 3Cx proteins, curved arrows, and 4Cx proteins, large arrowheads). All images are highly zoomed and rendered confocal z-slice projections. For qualitative purposes, displayed images were also constructed using automated scale bar, object frame (grid, tickmarks and box) and XYZ clipping plane (i.e. crops object below the plane). The set camera angle logarithmic functions were also applied to measure angle, elevation and azimuth parameters for each of the images represented. This was as follows: angle = −5.6521 (A), 4.4572 (B), −6.3247 (C), −0.0729 (D), elevation = 91.8453 (A), 88.6771 (B), 93.7761 (C), 90.0196 (D), azimuth = 119.9393 (A), −65.222 (B), 127.6513 (C), 93.3840 (D).

Article Snippet: The size of each Cx plaque was measured in voxels (X, Y and Z dimensions) and pixels (2-dimensions only) following acquisition using Imaris 3D-reconstruction image analysis and processing software (Bitplane Inc, Saint Paul, MN) version 7.0.

Techniques: Immunohistochemistry, Fluorescence, Staining, Immunostaining, Construct